time-to-botec

Benchmark sampling in different programming languages
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commit 3d3a3f0045e248ebe2608ddf55c6fa5ae30e3b93
parent 2a39a04c690e8854bde55432e1374dcf7710a80d
Author: NunoSempere <nuno.sempere@protonmail.com>
Date:   Sat, 18 Nov 2023 22:50:03 +0000

tweak: try simplest version, but notice it doesn't work

$ make time-linux
Requires /bin/time, found on GNU/Linux systems

Running 100x and taking avg time: OMP_NUM_THREADS=1 out/samples
Time using 1 thread: 34.50ms

Running 100x and taking avg time: OMP_NUM_THREADS=2 out/samples
Time using 2 threads: 34.60ms

Running 100x and taking avg time: OMP_NUM_THREADS=4 out/samples
Time for 4 threads: 32.00ms

Running 100x and taking avg time: OMP_NUM_THREADS=8 out/samples
Time using 8 threads: 30.40ms

Running 100x and taking avg time: OMP_NUM_THREADS=16 out/samples
Time using 16 threads: 30.80ms

Diffstat:
MC/alt/05-refactor-split-array/out/samples | 0
MC/alt/05-refactor-split-array/samples.c | 42+++++++++++++++++++++++-------------------
2 files changed, 23 insertions(+), 19 deletions(-)

diff --git a/C/alt/05-refactor-split-array/out/samples b/C/alt/05-refactor-split-array/out/samples Binary files differ. diff --git a/C/alt/05-refactor-split-array/samples.c b/C/alt/05-refactor-split-array/samples.c @@ -6,7 +6,7 @@ const float PI = 3.14159265358979323846; -#define N 1000000 +#define N_SAMPLES 1024 * 1000 //Array helpers @@ -81,7 +81,7 @@ float split_array_sum(float** meta_array, int length, int divided_into) uint32_t xorshift32(uint32_t* seed) { - // Algorithm "xor" from p. 4 of Marsaglia, "Xorshift RNGs" + // Algorithm "xor" from p. 4 of Marsaglia, "Xorshift RN_SAMPLESGs" // See <https://stackoverflow.com/questions/53886131/how-does-xorshift32-works> // https://en.wikipedia.org/wiki/Xorshift // Also some drama: <https://www.pcg-random.org/posts/on-vignas-pcg-critique.html>, <https://prng.di.unimi.it/> @@ -103,10 +103,10 @@ float rand_0_to_1(uint32_t* seed) x ^= x << 13; x ^= x >> 17; x ^= x << 5; - return ((float)(*seed = x))/((float) UINT32_MAX); + return ((float)(*seed = x))/((float) UIN_SAMPLEST32_MAX); */ // previously: - // ((float)rand_r(seed) / (float)RAND_MAX) + // ((float)rand_r(seed) / (float)RAN_SAMPLESD_MAX) // and before that: rand, but it wasn't thread-safe. // See: <https://stackoverflow.com/questions/43151361/how-to-create-thread-safe-random-number-generator-in-c-using-rand-r> for why to use rand_r: // rand() is not thread-safe, as it relies on (shared) hidden seed. @@ -142,11 +142,11 @@ float random_lognormal(float logmean, float logsigma, uint32_t* seed) float random_to(float low, float high, uint32_t* seed) { - const float NORMAL95CONFIDENCE = 1.6448536269514722; + const float N_SAMPLESORMAL95CON_SAMPLESFIDEN_SAMPLESCE = 1.6448536269514722; float loglow = logf(low); float loghigh = logf(high); float logmean = (loglow + loghigh) / 2; - float logsigma = (loghigh - loglow) / (2.0 * NORMAL95CONFIDENCE); + float logsigma = (loghigh - loglow) / (2.0 * N_SAMPLESORMAL95CON_SAMPLESFIDEN_SAMPLESCE); return random_lognormal(logmean, logsigma, seed); } @@ -179,8 +179,12 @@ float mixture(float (*samplers[])(uint32_t*), float* weights, int n_dists, uint3 } // Parallization function -void paralellize(float (*sampler)(uint32_t* seed), float** results, int n_threads){ - +void paralellize(float (*sampler)(uint32_t* seed), float* results, int n_threads, int n_samples){ + if((N_SAMPLES % n_threads) != 0){ + fprintf(stderr, "Number of samples isn't divisible by number of threads, aborting\n"); + exit(1); + } + // int n_samples_per_thread = N_SAMPLES / n_thread; int sample_index, i, split_array_length; uint32_t** seeds = malloc(n_threads * sizeof(uint32_t*)); for (uint32_t i = 0; i < n_threads; i++) { @@ -188,13 +192,16 @@ void paralellize(float (*sampler)(uint32_t* seed), float** results, int n_thread *seeds[i] = i + 1; // xorshift can't start with 0 } - #pragma omp parallel private(i, sample_index, split_array_length) + #pragma omp parallelz private(i, sample_index, split_array_length) { #pragma omp for for (i = 0; i < n_threads; i++) { - split_array_length = split_array_get_length(i, N, n_threads); - for (int j = 0; j < split_array_length; j++) { - results[i][j] = sampler(seeds[i]); + // split_array_length = split_array_get_length(i, N_SAMPLES, n_threads); + int lower_bound = i * (n_samples / n_threads); + int upper_bound = ((i+1) * (n_samples / n_threads)) - 1; + // printf("Lower bound: %d, upper bound: %d\n", lower_bound, upper_bound); + for (int j = lower_bound; j < upper_bound; j++) { + results[j] = sampler(seeds[i]); } } } @@ -247,14 +254,11 @@ float sample_mixture(uint32_t* seed){ int main() { int n_threads = omp_get_max_threads(); - // printf("Max threads: %d\n", n_threads); - // omp_set_num_threads(n_threads); - float** split_array_results = malloc(n_threads * sizeof(float*)); - split_array_allocate(split_array_results, N, n_threads); + float* split_array_results = malloc(N_SAMPLES * sizeof(float)); - paralellize(sample_mixture, split_array_results, n_threads); - printf("Sum(split_array_results, N)/N = %f\n", split_array_sum(split_array_results, N, n_threads) / N); + paralellize(sample_mixture, split_array_results, n_threads, N_SAMPLES); + printf("Sum(split_array_results, N_SAMPLES)/N_SAMPLES = %f\n", array_sum(split_array_results, N_SAMPLES) / N_SAMPLES); - split_array_free(split_array_results, n_threads); + free(split_array_results); return 0; }