time-to-botec

Benchmark sampling in different programming languages
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README.md (4702B)


      1 <!--
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      3 @license Apache-2.0
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      5 Copyright (c) 2018 The Stdlib Authors.
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      7 Licensed under the Apache License, Version 2.0 (the "License");
      8 you may not use this file except in compliance with the License.
      9 You may obtain a copy of the License at
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     11    http://www.apache.org/licenses/LICENSE-2.0
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     13 Unless required by applicable law or agreed to in writing, software
     14 distributed under the License is distributed on an "AS IS" BASIS,
     15 WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
     16 See the License for the specific language governing permissions and
     17 limitations under the License.
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     19 -->
     20 
     21 # Logarithm of Probability Density Function
     22 
     23 > [Beta][beta-distribution] distribution logarithm of probability density function (PDF).
     24 
     25 <section class="intro">
     26 
     27 The [probability density function][pdf] (PDF) for a [beta][beta-distribution] random variable is
     28 
     29 <!-- <equation class="equation" label="eq:beta_pdf" align="center" raw="f(x;\alpha,\beta)= \begin{cases} \frac{\Gamma(\alpha + \beta)}{\Gamma(\alpha) + \Gamma(\beta)}{x^{\alpha-1}(1-x)^{\beta-1}} & \text{ for } x \in (0,1) \\ 0 & \text{ otherwise } \end{cases}" alt="Probability density function (PDF) for a beta distribution."> -->
     30 
     31 <div class="equation" align="center" data-raw-text="f(x;\alpha,\beta)= \begin{cases} \frac{\Gamma(\alpha + \beta)}{\Gamma(\alpha) + \Gamma(\beta)}{x^{\alpha-1}(1-x)^{\beta-1}} &amp; \text{ for } x \in (0,1) \\ 0 &amp; \text{ otherwise } \end{cases}" data-equation="eq:beta_pdf">
     32     <img src="https://cdn.jsdelivr.net/gh/stdlib-js/stdlib@51534079fef45e990850102147e8945fb023d1d0/lib/node_modules/@stdlib/stats/base/dists/beta/logpdf/docs/img/equation_beta_pdf.svg" alt="Probability density function (PDF) for a beta distribution.">
     33     <br>
     34 </div>
     35 
     36 <!-- </equation> -->
     37 
     38 where `alpha > 0` is the first shape parameter and `beta > 0` is the second shape parameter.
     39 
     40 </section>
     41 
     42 <!-- /.intro -->
     43 
     44 <section class="usage">
     45 
     46 ## Usage
     47 
     48 ```javascript
     49 var logpdf = require( '@stdlib/stats/base/dists/beta/logpdf' );
     50 ```
     51 
     52 #### logpdf( x, alpha, beta )
     53 
     54 Evaluates the natural logarithm of the [probability density function][pdf] (PDF) for a [beta][beta-distribution]  distribution with parameters `alpha` (first shape parameter) and `beta` (second shape parameter).
     55 
     56 ```javascript
     57 var y = logpdf( 0.5, 0.5, 1.0 );
     58 // returns ~-0.347
     59 
     60 y = logpdf( 0.1, 1.0, 1.0 );
     61 // returns 0.0
     62 
     63 y = logpdf( 0.8, 4.0, 2.0 );
     64 // returns ~0.717
     65 ```
     66 
     67 If provided an input value `x` outside the support `[0,1]`, the function returns `-Infinity`.
     68 
     69 ```javascript
     70 var y = logpdf( -0.1, 1.0, 1.0 );
     71 // returns -Infinity
     72 
     73 y = logpdf( 1.1, 1.0, 1.0 );
     74 // returns -Infinity
     75 ```
     76 
     77 If provided `NaN` as any argument, the function returns `NaN`.
     78 
     79 ```javascript
     80 var y = logpdf( NaN, 1.0, 1.0 );
     81 // returns NaN
     82 
     83 y = logpdf( 0.0, NaN, 1.0 );
     84 // returns NaN
     85 
     86 y = logpdf( 0.0, 1.0, NaN );
     87 // returns NaN
     88 ```
     89 
     90 If provided `alpha <= 0`, the function returns `NaN`.
     91 
     92 ```javascript
     93 var y = logpdf( 0.5, 0.0, 1.0 );
     94 // returns NaN
     95 
     96 y = logpdf( 0.5, -1.0, 1.0 );
     97 // returns NaN
     98 ```
     99 
    100 If provided `beta <= 0`, the function returns `NaN`.
    101 
    102 ```javascript
    103 var y = logpdf( 0.5, 1.0, 0.0 );
    104 // returns NaN
    105 
    106 y = logpdf( 0.5, 1.0, -1.0 );
    107 // returns NaN
    108 ```
    109 
    110 #### logpdf.factory( alpha, beta )
    111 
    112 Returns a `function` for evaluating the natural logarithm of the [PDF][pdf] for a [beta][beta-distribution]  distribution with parameters `alpha` (first shape parameter) and `beta` (second shape parameter).
    113 
    114 ```javascript
    115 var mylogPDF = logpdf.factory( 0.5, 0.5 );
    116 
    117 var y = mylogPDF( 0.8 );
    118 // returns ~-0.228
    119 
    120 y = mylogPDF( 0.3 );
    121 // returns ~-0.364
    122 ```
    123 
    124 </section>
    125 
    126 <!-- /.usage -->
    127 
    128 <section class="notes">
    129 
    130 ## Notes
    131 
    132 -   In virtually all cases, using the `logpdf` or `logcdf` functions is preferable to manually computing the logarithm of the `pdf` or `cdf`, respectively, since the latter is prone to overflow and underflow.
    133 
    134 </section>
    135 
    136 <!-- /.notes -->
    137 
    138 <section class="examples">
    139 
    140 ## Examples
    141 
    142 <!-- eslint no-undef: "error" -->
    143 
    144 ```javascript
    145 var randu = require( '@stdlib/random/base/randu' );
    146 var EPS = require( '@stdlib/constants/float64/eps' );
    147 var logpdf = require( '@stdlib/stats/base/dists/beta/logpdf' );
    148 
    149 var alpha;
    150 var beta;
    151 var x;
    152 var y;
    153 var i;
    154 
    155 for ( i = 0; i < 10; i++ ) {
    156     x = randu();
    157     alpha = ( randu()*5.0 ) + EPS;
    158     beta = ( randu()*5.0 ) + EPS;
    159     y = logpdf( x, alpha, beta );
    160     console.log( 'x: %d, α: %d, β: %d, ln(f(x;α,β)): %d', x.toFixed( 4 ), alpha.toFixed( 4 ), beta.toFixed( 4 ), y.toFixed( 4 ) );
    161 }
    162 ```
    163 
    164 </section>
    165 
    166 <!-- /.examples -->
    167 
    168 <section class="links">
    169 
    170 [beta-distribution]: https://en.wikipedia.org/wiki/Beta_distribution
    171 
    172 [pdf]: https://en.wikipedia.org/wiki/Probability_density_function
    173 
    174 </section>
    175 
    176 <!-- /.links -->